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1

Scalable molecular dynamics with NAMD

James C. Phillips, Rosemary Braun, Wei Wang, James Gumbart, Emad Tajkhorshid, Elizabeth Villa, Christophe Chipot, Robert D. Skeel, Laxmikant Kalé, Klaus Schulten

Journal:

Journal of Computational Chemistry

Année:

2005

Langue:

english

Fichier:

PDF, 977 KB

english, 2005

2

NAMD2: Greater Scalability for Parallel Molecular Dynamics

Laxmikant Kalé, Robert Skeel, Milind Bhandarkar, Robert Brunner, Attila Gursoy, Neal Krawetz, James Phillips, Aritomo Shinozaki, Krishnan Varadarajan, Klaus Schulten

Journal:

Journal of Computational Physics

Année:

1999

Langue:

english

Fichier:

PDF, 197 KB

english, 1999

3

The reduce-or process model for parallel execution of logic programs

Laxmikant V. Kalé

Journal:

The Journal of Logic Programming

Année:

1991

Langue:

english

Fichier:

PDF, 2.15 MB

english, 1991

4

[IEEE Distributed Processing, Workshops and Phd Forum (IPDPSW) - Atlanta, GA, USA (2010.04.19-2010.04.23)] 2010 IEEE International Symposium on Parallel & Distributed Processing, Workshops and Phd Forum (IPDPSW) - Static macro data flow: Compiling global control into local control

Jetley, Pritish, Kale, Laxmikant V.

Année:

2010

Langue:

english

Fichier:

PDF, 383 KB

english, 2010

5

Development and Validation of Magnetic Bead Pentaplex Immunoassay for Simultaneous Quantification of murine serum IgG antibodies to Acellular Pertussis, Diphtheria and Tetanus Antigens used in combination vaccines

Kadam, Laxmikant, Patel, Krunal, Gautam, Manish, Thorat, Shrikant, Kale, Prathamesh, Ghule, Arvind Kumar, Rao, Harish, Shinde, Yojana, Shaligram, Umesh, Gairola, Sunil

Journal:

Année:

2019

Fichier:

PDF, 1.29 MB

2019

6

OR parallel execution of Prolog programs with side effects

Laxmikant V. Kale, David A. Padua, David C. Sehr

Journal:

The Journal of Supercomputing

Année:

1988

Langue:

english

Fichier:

PDF, 796 KB

english, 1988

7

[IEEE Distributed Processing, Workshops and Phd Forum (IPDPSW) - Anchorage, AK, USA (2011.05.16-2011.05.20)] 2011 IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum - Evaluation of Simple Causal Message Logging for Large-Scale Fault Tolerant HPC Systems

Meneses, Esteban, Bronevetsky, Greg, Kale, Laxmikant V.

Année:

2011

Langue:

english

Fichier:

PDF, 906 KB

english, 2011

8

[IEEE 2013 IEEE International Symposium on Parallel & Distributed Processing, Workshops and Phd Forum (IPDPSW) - Cambridge, MA, USA (2013.05.20-2013.05.24)] 2013 IEEE International Symposium on Parallel & Distributed Processing, Workshops and Phd Forum - Toward Runtime Power Management of Exascale Networks by on/off Control of Links

Totoni, Ehsan, Jain, Nikhil, Kale, Laxmikant V.

Année:

2013

Langue:

english

Fichier:

PDF, 600 KB

english, 2013

9

[IEEE 2012 41st International Conference on Parallel Processing (ICPP) - Pittsburgh, PA, USA (2012.09.10-2012.09.13)] 2012 41st International Conference on Parallel Processing - A Hierarchical Approach for Load Balancing on Parallel Multi-core Systems

Pilla, Laercio L., Ribeiro, Christiane Pousa, Cordeiro, Daniel, Mei, Chao, Bhatele, Abhinav, Navaux, Philippe O.A., Broquedis, Francois, Mehaut, Jean-Francois, Kale, Laxmikant V.

Année:

2012

Langue:

english

Fichier:

PDF, 237 KB

english, 2012

10

[IEEE 2012 26th IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW) - Shanghai, China (2012.05.21-2012.05.25)] 2012 IEEE 26th International Parallel and Distributed Processing Symposium Workshops & PhD Forum - Simulating the Spread of Infectious Disease over Large Realistic Social Networks Using Charm++

Bisset, Keith R., Aji, Ashwin M., Bohm, Eric, Kale, Laxmikant V., Kamal, Tariq, Marathe, Madhav V., Yeom, Jae-Seung

Année:

2012

Langue:

english

Fichier:

PDF, 1.00 MB

english, 2012

11

[IEEE Proceedings 20th IEEE International Parallel & Distributed Processing Symposium - Rhodes Island, Greece (2006.04.25-2006.04.29)] Proceedings 20th IEEE International Parallel & Distributed Processing Symposium - Topology-aware task mapping for reducing communication contention on large parallel machines

Agarwal, T., Sharma, A., Laxmikant, A., Kale, L.V.

Année:

2006

Langue:

english

Fichier:

PDF, 237 KB

english, 2006

12

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - Towards scalable performance analysis and visualization through data reduction

Chee Wai Lee,, Mendes, Celso, Kale, Laxmikant V.

Année:

2008

Langue:

english

Fichier:

PDF, 225 KB

english, 2008

13

[IEEE Distributed Processing, Workshops and Phd Forum (IPDPSW) - Atlanta, GA, USA (2010.04.19-2010.04.23)] 2010 IEEE International Symposium on Parallel & Distributed Processing, Workshops and Phd Forum (IPDPSW) - Detecting and using critical paths at runtime in message driven parallel programs

Dooley, Isaac, Kale, Laxmikant V.

Année:

2010

Langue:

english

Fichier:

PDF, 303 KB

english, 2010

14

[IEEE Distributed Processing Symposium (IPDPS) - Anchorage, AK, USA (2011.05.16-2011.05.20)] 2011 IEEE International Parallel & Distributed Processing Symposium - Architectural Constraints to Attain 1 Exaflop/s for Three Scientific Application Classes

Bhatele, Abhinav, Jetley, Pritish, Gahvari, Hormozd, Wesolowski, Lukasz, Gropp, William D., Kalé, Laxmikant

Année:

2011

Langue:

english

Fichier:

PDF, 770 KB

english, 2011

15

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - NOISEMINER: An algorithm for scalable automatic computational noise and software interference detection

Dooley, Isaac, Chao Mei,, Kale, Laxmikant

Année:

2008

Langue:

english

Fichier:

PDF, 392 KB

english, 2008

16

[IEEE 2007 IEEE International Parallel and Distributed Processing Symposium - Long Beach, CA, USA (2007.03.26-2007.03.30)] 2007 IEEE International Parallel and Distributed Processing Symposium - A Fault Tolerance Protocol with Fast Fault Recovery

Chakravorty, Sayantan, Kale, Laxmikant V.

Année:

2007

Langue:

english

Fichier:

PDF, 252 KB

english, 2007

17

[IEEE 2007 IEEE International Parallel and Distributed Processing Symposium - Long Beach, CA, USA (2007.03.26-2007.03.30)] 2007 IEEE International Parallel and Distributed Processing Symposium - Optimizing Distributed Application Performance Using Dynamic Grid Topology-Aware Load Balancing

Koenig, Gregory A., Kale, Laxmikant V.

Année:

2007

Langue:

english

Fichier:

PDF, 211 KB

english, 2007

18

[IEEE 2010 IEEE International Symposium on Parallel & Distributed Processing (IPDPS) - Atlanta, GA, USA (2010.04.19-2010.04.23)] 2010 IEEE International Symposium on Parallel & Distributed Processing (IPDPS) - Highly scalable parallel sorting

Solomonik, Edgar, Kale, Laxmikant V.

Année:

2010

Langue:

english

Fichier:

PDF, 526 KB

english, 2010

19

[IEEE 2012 IEEE International Symposium on Parallel & Distributed Processing (IPDPS) - Shanghai, China (2012.05.21-2012.05.25)] 2012 IEEE 26th International Parallel and Distributed Processing Symposium - Mapping Dense LU Factorization on Multicore Supercomputer Nodes

Lifflander, Jonathan, Miller, Phil, Venkataraman, Ramprasad, Arya, Anshu, Kale, Laxmikant, Jones, Terry

Année:

2012

Langue:

english

Fichier:

PDF, 983 KB

english, 2012

20

[IEEE 2009 International Conference on Parallel Processing (ICPP) - Vienna, Austria (2009.09.22-2009.09.25)] 2009 International Conference on Parallel Processing - Integrated Performance Views in Charm++: Projections Meets TAU

Biersdorff, Scott, Lee, Chee Wai, Malony, Allen D., Kale, Laxmikant V.

Année:

2009

Fichier:

PDF, 3.83 MB

2009

21

[IEEE 2014 43nd International Conference on Parallel Processing (ICPP) - MN, USA (2014.9.9-2014.9.12)] 2014 43rd International Conference on Parallel Processing - TRAM: Optimizing Fine-Grained Communication with Topological Routing and Aggregation of Messages

Wesolowski, Lukasz, Venkataraman, Ramprasad, Gupta, Abhishek, Yeom, Jae-Seung, Bisset, Keith, Sun, Yanhua, Jetley, Pritish, Quinn, Thomas R., Kale, Laxmikant V.

Année:

2014

Langue:

english

Fichier:

PDF, 488 KB

english, 2014

22

[IEEE 2014 43nd International Conference on Parallel Processing (ICPP) - MN, USA (2014.9.9-2014.9.12)] 2014 43rd International Conference on Parallel Processing - Scaling the ISAM Land Surface Model through Parallelization of Inter-component Data Transfer

Miller, Phil, Robson, Michael, El-Masri, Bassil, Barman, Rahul, Zheng, Gengbin, Jain, Atul, Kale, Laxmikant

Année:

2014

Langue:

english

Fichier:

PDF, 961 KB

english, 2014

23

[IEEE 2013 IEEE International Symposium on Parallel & Distributed Processing, Workshops and Phd Forum (IPDPSW) - Cambridge, MA, USA (2013.05.20-2013.05.24)] 2013 IEEE International Symposium on Parallel & Distributed Processing, Workshops and Phd Forum - Towards Efficient Mapping, Scheduling, and Execution of HPC Applications on Platforms in Cloud

Gupta, Abhishek, Kale, Laxmikant V.

Année:

2013

Langue:

english

Fichier:

PDF, 536 KB

english, 2013

24

[IEEE Distributed Processing, Workshops and Phd Forum (IPDPSW) - Anchorage, AK, USA (2011.05.16-2011.05.20)] 2011 IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum - Programming Heterogeneous Systems

Kunzman, David M., Kale, Laxmikant V.

Année:

2011

Langue:

english

Fichier:

PDF, 702 KB

english, 2011

25

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - Overcoming scaling challenges in biomolecular simulations across multiple platforms

Abhinav Bhatele,, Sameer Kumar,, Chao Mei,, Phillips, James C., Gengbin Zheng,, Kale, Laxmikant V.

Année:

2008

Langue:

english

Fichier:

PDF, 1.46 MB

english, 2008

26

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - Massively parallel cosmological simulations with ChaNGa

Jetley, Pritish, Gioachin, Filippo, Mendes, Celso, Kale, Laxmikant V., Quinn, Thomas

Année:

2008

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2008

27

[IEEE Distributed Processing (IPDPS) - Rome, Italy (2009.05.23-2009.05.29)] 2009 IEEE International Symposium on Parallel & Distributed Processing - Dynamic high-level scripting in parallel applications

Gioachin, Filippo, Kale, Laxmikant V.

Année:

2009

Langue:

english

Fichier:

PDF, 293 KB

english, 2009

28

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - Application-specific topology-aware mapping for three dimensional topologies

Bhatele, Abhinav, Kale, Laxmikant V.

Année:

2008

Langue:

english

Fichier:

PDF, 212 KB

english, 2008

29

[IEEE Distributed Processing, Workshops and Phd Forum (IPDPSW) - Anchorage, AK, USA (2011.05.16-2011.05.20)] 2011 IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum - Using Shared Arrays in Message-Driven Parallel Programs

Miller, Phil, Becker, Aaron, Kale, Laxmikant

Année:

2011

Langue:

english

Fichier:

PDF, 871 KB

english, 2011

30

[IEEE Distributed Processing, Workshops and Phd Forum (IPDPSW) - Anchorage, AK, USA (2011.05.16-2011.05.20)] 2011 IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum - An Adaptive Framework for Large-Scale State Space Search

Sun, Yanhua, Zheng, Gengbin, Jetley, Pritish, Kale, Laxmikant V.

Année:

2011

Langue:

english

Fichier:

PDF, 1.14 MB

english, 2011

31

[IEEE Distributed Processing, Workshops and Phd Forum (IPDPSW) - Anchorage, AK, USA (2011.05.16-2011.05.20)] 2011 IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum - Temperature Aware Load Balancing for Parallel Applications: Preliminary Work

Sarood, Osman, Gupta, Abhishek, Kale, Laxmikant V.

Année:

2011

Langue:

english

Fichier:

PDF, 760 KB

english, 2011

32

QUANTIFYING NETWORK CONTENTION ON LARGE PARALLEL MACHINES

BHATELÉ, ABHINAV, KALÉ, LAXMIKANT V.

Journal:

Parallel Processing Letters

Année:

2009

Langue:

english

Fichier:

PDF, 2.38 MB

english, 2009

33

PARSSSE: AN ADAPTIVE PARALLEL STATE SPACE SEARCH ENGINE

SUN, YANHUA, ZHENG, GENGBIN, JETLEY, PRITISH, KALE, LAXMIKANT V.

Journal:

Parallel Processing Letters

Année:

2011

Langue:

english

Fichier:

PDF, 827 KB

english, 2011

34

Benefits of Topology Aware Mapping for Mesh Interconnects

Bhatelé, Abhinav, Kalé, Laxmikant V.

Journal:

Parallel Processing Letters

Année:

2008

Langue:

english

Fichier:

PDF, 2.35 MB

english, 2008

35

[IEEE 2012 26th IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW) - Shanghai, China (2012.05.21-2012.05.25)] 2012 IEEE 26th International Parallel and Distributed Processing Symposium Workshops & PhD Forum - Dynamic Scheduling for Work Agglomeration on Heterogeneous Clusters

Lifflander, Jonathan, Evans, G. Carl, Arya, Anshu, Kale, Laxmikant V.

Année:

2012

Langue:

english

Fichier:

PDF, 587 KB

english, 2012

36

[Lecture Notes in Computer Science] Parallel and Distributed Processing Volume 1586 || From task scheduling in single processor environments to message scheduling in a PROFIBUS fieldbus network

Rolim, José, Mueller, Frank, Zomaya, Albert Y., Ercal, Fikret, Olariu, Stephan, Ravindran, Binoy, Gustafsson, Jan, Takada, Hiroaki, Olsson, Ron, Kale, Laxmikant V., Beckman, Pete, Haines, Matthew, ElG

Année:

1999

Langue:

english

Fichier:

PDF, 813 KB

english, 1999

37

[Lecture Notes in Computer Science] Parallel and Distributed Processing Volume 1586 || Transparent real-time monitoring in MPI

Rolim, José, Mueller, Frank, Zomaya, Albert Y., Ercal, Fikret, Olariu, Stephan, Ravindran, Binoy, Gustafsson, Jan, Takada, Hiroaki, Olsson, Ron, Kale, Laxmikant V., Beckman, Pete, Haines, Matthew, ElG

Année:

1999

Langue:

english

Fichier:

PDF, 629 KB

english, 1999

38

Scalable Molecular Dynamics with NAMD on the Summit System

Acun, Bilge, Hardy, David, Kale, Laxmikant, Li, Ke, Phillips, James C., Stone, John E.

Journal:

IBM Journal of Research and Development

Année:

2018

Langue:

english

Fichier:

PDF, 718 KB

english, 2018

39

Optimizing communication for Charm++ applications by reducing network contention

Abhinav Bhatelé, Eric Bohm, Laxmikant V. Kalé

Journal:

Concurrency and Computation: Practice and Experience

Année:

2011

Langue:

english

Fichier:

PDF, 176 KB

english, 2011

40

Supporting dynamic parallel object arrays

Orion S. Lawlor, Laxmikant V. Kalé

Journal:

Concurrency and Computation: Practice and Experience

Année:

2003

Langue:

english

Fichier:

PDF, 283 KB

english, 2003

41

Scalable fine-grained parallelization of plane-wave–based ab initio molecular dynamics for large supercomputers

Ramkumar V. Vadali, Yan Shi, Sameer Kumar, Laxmikant V. Kale, Mark E. Tuckerman, Glenn J. Martyna

Journal:

Journal of Computational Chemistry

Année:

2004

Langue:

english

Fichier:

PDF, 516 KB

english, 2004

42

Algorithmic Challenges in Computational Molecular Biophysics

Tamar Schlick, Robert D Skeel, Axel T Brunger, Laxmikant V Kalé, John A Board Jr., Jan Hermans, Klaus Schulten

Journal:

Journal of Computational Physics

Année:

1999

Langue:

english

Fichier:

PDF, 437 KB

english, 1999

43

MDScope — a visual computing environment for structural biology

Mark Nelson, William Humphrey, Richard Kufrin, Attila Gursoy, Andrew Dalke, Laxmikant Kale, Robert Skeel, Klaus Schulten

Journal:

Computer Physics Communications

Année:

1995

Langue:

english

Fichier:

PDF, 1.67 MB

english, 1995

44

Scaling applications to massively parallel machines using Projections performance analysis tool

Laxmikant V. Kalé, Gengbin Zheng, Chee Wai Lee, Sameer Kumar

Journal:

Future Generation Computer Systems

Année:

2006

Langue:

english

Fichier:

PDF, 823 KB

english, 2006

45

Performance and modularity benefits of message-driven execution

Attila Gürsoy, Laxmikant V. Kale

Journal:

Journal of Parallel and Distributed Computing

Année:

2004

Langue:

english

Fichier:

PDF, 430 KB

english, 2004

46

A join algorithm for combining AND parallel solutions in AND/OR parallel systems

Balkrishna Ramkumar, Laxmikant V. Kalé

Journal:

International Journal of Parallel Programming

Année:

1992

Langue:

english

Fichier:

PDF, 1.94 MB

english, 1992

47

ParFUM: a parallel framework for unstructured meshes for scalable dynamic physics applications

Orion S. Lawlor, Sayantan Chakravorty, Terry L. Wilmarth, Nilesh Choudhury, Isaac Dooley, Gengbin Zheng, Laxmikant V. Kalé

Journal:

Engineering with Computers

Année:

2006

Langue:

english

Fichier:

PDF, 574 KB

english, 2006

48

Parallel adaptive simulations of dynamic fracture events

Sandhya Mangala, Terry Wilmarth, Sayantan Chakravorty, Nilesh Choudhury, Laxmikant V. Kalé, Philippe H. Geubelle

Journal:

Engineering with Computers

Année:

2008

Langue:

english

Fichier:

PDF, 1.48 MB

english, 2008

49

Simulation-Based Performance Prediction for Large Parallel Machines

Gengbin Zheng, Terry Wilmarth, Praveen Jagadishprasad, Laxmikant V. Kalé

Journal:

International Journal of Parallel Programming

Année:

2005

Langue:

english

Fichier:

PDF, 481 KB

english, 2005

50

Parallel Simulations of Dynamic Fracture Using Extrinsic Cohesive Elements

Isaac Dooley, Sandhya Mangala, Laxmikant Kale, Philippe Geubelle

Journal:

Journal of Scientific Computing

Année:

2009

Langue:

english

Fichier:

PDF, 1.83 MB

english, 2009